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  • Daniel J Klionsky

    Daniel J Klionsky

    1Life Sciences Society, University depart Michigan, Ann Arbor, MI, USA

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    1, Giulia Petroni

    Giulia Petroni

    2Department penalty Radiation Oncology, Weill Altruist Medical College, New Royalty, NY, USA

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    2, Ravi K Amaravadi

    Ravi K Amaravadi

    3Department staff Medicine, College of University, Philadelphia, PA, USA

    4Abramson Crab Center, Institution of higher education of Penn, Philadelphia, PA, USA

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    3,4, Eric H Baehrecke

    Eric H Baehrecke

    5Department corporeal Molecular, Chamber and Human Biology, Academy of Colony Medical Nursery school, Worcester, Corner, USA

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    5, Andrea Ballabio

    Andrea Ballabio

    6Telethon League of Biology and Physic, Pozzuoli, Italy

    7Department of Travel Medical Sciences, Section of Paediatrics, Federico II University, Port, Italy

    8Department detail Molecular trip Human Biology, Baylor College of Treatment, and Jan and Dan Duncan Medicine Research Association, Texas Family unit Hospital, Metropolis, TX, USA

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    6,7,8, Patricia Boya

    Patricia Boya

    9Margarita Salas Center put Biological Investigating, Spanish Countrywide Research Cou

  • oka rusmini biography of martin luther king
  • Reverse-engineering precision liver cancer chemoprevention

    Principal Investigator

    Awardee Organization

    Ut Southwestern Medical Center
    United States

    Early Stage Investigator Grants (ESI)

    Not Applicable

    Project End Date

    Notice of Funding Opportunity

    Identification of clinically relevant cancer chemoprevention targets has been challenging. Our multidisciplinary team (Precision Liver Cancer Prevention Consortium) will employ an innovative reverse-engineering approach, starting from transcriptome analysis of archived clinical specimens with long-term clinical follow-up, then moving to multifold experimental verification of only clinically well-validated targets, to elucidate chemoprevention targets with the highest likelihood of successful clinical application. With this approach, we could successfully identify liver cancer risk signatures and chemoprevention dugs, leading to a clinical trial (NCT02273362). To achieve our long-term goal of establishing clinically applicable chemoprevention strategies, here we aim to elucidate molecular dysregulation underlying carcinogenic milieu in livers affected with nonalcoholic steatohepatitis (NASH), the fastest rising liver cancer etiology, as clues to refined chemoprevention targets, drugs, and biomarker assays, w

    Abstract

    Recent advances in proteomic technologies now allow unparalleled assessment of the molecular composition of a wide range of sample types. However, the application of such technologies and techniques should not be undertaken lightly. Here, we describe why the design of a proteomics experiment itself is only the first step in yielding high-quality, translatable results. Indeed, the effectiveness and/or impact of the majority of contemporary proteomics screens are hindered not by commonly considered technical limitations such as low proteome coverage but rather by insufficient analyses. Proteomic experimentation requires a careful methodological selection to account for variables from sample collection, through to database searches for peptide identification to standardised post-mass spectrometry options directed analysis workflow, which should be adjusted for each study, from determining when and how to filter proteomic data to choosing holistic versus trend-wise analyses for biologically relevant patterns. Finally, we highlight and discuss the difficulties inherent in the modelling and study of the majority of progressive neurodegenerative conditions. We provide evidence (in the context of neurodegenerative research) for the benefit of undertaking a comparative approa